Welcome to DINC-COVID!

DINC-COVID is a webserver for ensemble docking to SARS-CoV-2 proteins using DINC

Ligand*

A small molecule (such as a drug or a peptide) in a .pdb or .mol2 file.

Prepare ligand

If you have already prepared your ligand (i.e. added hydrogens, charges, etc), deselect this box. If you want your ligand file to be used as is, please upload a .mol2 file.

Receptor*

Main Protease (catalytic site) Main Protease (allosteric site) RNA Dependent RNA Polymerase (NCB site) Papain-like Protease (catalytic site) Spike protein (receptor-binding motif) Helicase protein (ADP site) Helicase protein (NCB site)

Choose a SARS-CoV-2 protein

Ensemble*

GROMOS snapshots CHARMM snapshots crystals all ensembles

Ensemble*

ANTON snapshots all ensembles

Ensemble*

Output Size

Number of top-scoring binding modes selected for each scoring function (limit 10)

User email*

Your email address will only be used to send you a link to the docking results

Important note

If you are interested in using DINC-COVID in ways that go beyond what is offered by this server, feel free to contact us.

Privacy policy

Data and results of each user are not accessible to other users, but we cannot guarantee full privacy. We assume the data submitted to DINC-COVID is not strictly confidential.

Data retention policy

Data and results will be stored on the server only for a limited amount of time. The content of the server will be periodically deleted.